
The .cm files in this folder were generated by extracting only those RFAM entries that
had members from the Bacteria and Viruses divisions (based on their taxonomy ID in the .gff3 file)

Archaea had no entries, so we just use Bacteria.


-    523 #=GF TP   Gene; miRNA;  # microRNA - euk only?
-    421 #=GF TP   Gene; snRNA; snoRNA; CD-box; # Small nucleolar RNAs
+    252 #=GF TP   Gene; sRNA; #
-    225 #=GF TP   Gene; snRNA; snoRNA; HACA-box; Small nucleolar RNAs
-    225 #=GF TP   Gene; lncRNA; # Long non-coding RNAs > 200 bp
+    218 #=GF TP   Cis-reg;
+     87 #=GF TP   Gene;
+     65 #=GF TP   Gene; CRISPR;
+     28 #=GF TP   Cis-reg; frameshift_element;
+     27 #=GF TP   Cis-reg; IRES;
+     26 #=GF TP   Cis-reg; riboswitch;
+     23 #=GF TP   Gene; antisense;
-     18 #=GF TP   Gene; snRNA; snoRNA; scaRNA;
+     15 #=GF TP   Gene; ribozyme;
-     11 #=GF TP   Gene; snRNA; splicing;
+     11 #=GF TP   Cis-reg; leader;
+     10 #=GF TP   Intron;
+      7 #=GF TP   Cis-reg; thermoregulator;
-      6 #=GF TP   Gene; rRNA; # rnammer
+      5 #=GF TP   Gene; antitoxin;
-      3 #=GF TP   Gene; snRNA;
-      2 #=GF TP   Gene; tRNA; # aragorn
